CSMA: A Standalone and ImageJ-Compatible Tool for Enhanced Wound Healing Assay Analysis

dc.contributor.authorTri Thanh Pham
dc.contributor.authorAmina Sagymbayeva
dc.contributor.authorTimur Elebessov
dc.contributor.authorZhadyra Onzhanova
dc.contributor.authorFerdinand Molnár
dc.date.accessioned2025-08-26T11:26:04Z
dc.date.available2025-08-26T11:26:04Z
dc.date.issued2025-01-01
dc.description.abstractAccurate quantification of wound closure in cell migration assays is crucial yet challenging. Still, existing methods often underperform due to omitting cell detection within the wound area, resulting in biased outcomes. We developed the CSMA standalone and ImageJ-compatible tool, which utilizes advanced image processing techniques, including contrast enhancement, edge detection, and morphological operations, to precisely identify and quantify cells in the wound region. CSMA offers user‑friendly features and adjustable parameters to accommodate different imaging conditions, ensuring robust performance across diverse experimental setups. Validation against conventional tools confirms CSMA’s superior ability to delineate wound boundaries and provide accurate estimations of area and width at every time point. As applied to SW480‑ADH colon cancer cells treated with various compounds, CSMA proves valuable in biomedical research. CSMA represents a significant advancement in wound healing assay analysis, providing researchers with a simple and reliable tool for studying cell migration dynamics with enhanced precision and reproducibility. en
dc.identifier.citationThanh Pham Tri, Sagymbayeva Amina, Elebessov Timur, Onzhanova Zhadyra, Molnár Ferdinand. (2025). CSMA: A Standalone and ImageJ-Compatible Tool for Enhanced Wound Healing Assay Analysis. IEEE Access. https://doi.org/10.1109/access.2025.3561607en
dc.identifier.doi10.1109/access.2025.3561607
dc.identifier.urihttps://doi.org/10.1109/access.2025.3561607
dc.identifier.urihttps://nur.nu.edu.kz/handle/123456789/10282
dc.language.isoen
dc.publisherInstitute of Electrical and Electronics Engineers (IEEE)
dc.rightsOpen accessen
dc.source(2025)en
dc.subjectWound healingen
dc.subjectComputer scienceen
dc.subjectBiomedical engineeringen
dc.subjectEngineeringen
dc.subjectMedicineen
dc.subjectSurgery; type of access: open accessen
dc.titleCSMA: A Standalone and ImageJ-Compatible Tool for Enhanced Wound Healing Assay Analysisen
dc.typearticleen

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