Geographical and temporal distribution of SARS-CoV-2 clades in the WHO European Region, January to June 2020
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European Centre for Disease Prevention and Control
Abstract
The study maps how SARS-CoV-2 genetic clades evolved over time and space across the WHO European Region (data until 10 July 2020), comparing three nomenclature systems (GISAID, Nextstrain, cov-lineages.org). It highlights the critical role of real-time sequencing, data sharing, and standardized nomenclature to enable effective pan-European genomic surveillance during pandemics.,
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The WHO European Region sequencing laboratories and GISAID EpiCoV group; Alm E; Broberg EK; Connor T; Hodcroft EB; Komissarov AB; Maurer-Stroh S; Melidou A; Neher RA; O’Toole Á; Pereyaslov D (2020). Geographical and temporal distribution of SARS-CoV-2 clades in the WHO European Region, January to June 2020. Eurosurveillance, 25(32):2001410. doi:10.2807/1560-7917.ES.2020.25.32.2001410