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COMPARATIVE ANALYSIS OF FRESHWATER PHYTOPLANKTON COMMUNITIES IN TWO LAKES OF BURABAY NATIONAL PARK USING MORPHOLOGICAL AND MOLECULAR APPROACHES

Malashenkov, Dmitry V.; Dashkova, Veronika; Zhakupova, Kymbat; Vorobjev, Ivan A.; Barteneva, Natasha S. (Scientific Reports, 2021-08-09)

We analyzed phytoplankton assemblages’ variations in oligo-mesotrophic Shchuchie and Burabay lakes using traditional morphological and next-generation sequencing (NGS) approaches. The total phytoplankton biodiversity and ...
Development of flow cytometry and microscopy techniques to monitor freshwater phytoplankton communities in Kazakhstani lakes

Dashkova, Veronika (Nazarbayev University School of Science and Technology, 2016)

In this project, we tested an approach based on separating fluorescent viability and metabolic dyes between different excitation lasers in order to reach minimal spectral overlap with the autofluorescent signal using flow ...
SEMI‑AUTOMATED CLASSIFCATION OF COLONIAL MICROCYSTIS BY FLOWCAM IMAGING FOW CYTOMETRY IN MESOCOSM EXPERIMENT REVEALS HIGH HETEROGENEITY DURING SEASONAL BLOOM

Mirasbekov, Yersultan; Zhumakhanova, Adina; Zhantuyakova, Almira; Sarkytbayev, Kuanysh; Malashenkov, Dmitry V.; Baishulakova, Assel; Dashkova, Veronika; Davidson, Thomas A.; Vorobjev, Ivan A.; Jeppesen, Erik; Barteneva, Natasha S. (Nature Research, 2021-04-30)

A machine learning approach was employed to detect and quantify Microcystis colonial morphospecies using FlowCAM-based imaging flow cytometry. The system was trained and tested using samples from a long-term mesocosm ...
SEMI-AUTOMATED CLASSIFICATION OF COLONIAL MICROCYSTIS BY FLOWCAM IMAGING FLOW CYTOMETRY IN MESOCOSM EXPERIMENT REVEALS HIGH HETEROGENEITY DURING SEASONAL BLOOM

Mirasbekov, Yersultan; Zhumakhanova, Adina; Zhantuyakova, Almira; Sarkytbayev, Kuanysh; Malashenkov, Dmitry V.; Baishulakova, Assel; Dashkova, Veronika; Davidson, Thomas A.; Vorobjev, Ivan A.; Jeppesen, Erik; Barteneva, Natasha S. (Scientific reports, 2021-04-30)

A machine learning approach was employed to detect and quantify Microcystis colonial morphospecies using FlowCAM-based imaging flow cytometry. The system was trained and tested using samples from a long-term mesocosm ...