Browsing Articles by Author "Olsen, Lars Rønn"

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Bioinformatics for cancer immunotherapy target discovery

Olsen, Lars Rønn; Campos, Benito; Barnkob, Mike Stein; Winther, Ole; Brusic, Vladimir; Andersen, Mads Hald (Cancer Immunology, Immunotherapy, 2014-12-04)

The mechanisms of immune response to cancer have been studied extensively and great effort has been invested into harnessing the therapeutic potential of the immune system. Immunotherapies have seen significant advances ...
BlockLogo: visualization of peptide and sequence motif conservation

Olsen, Lars Rønn; Kudahl, Ulrich Johan; Simon, Christian; Sun, Jing; Schönbach, Christian; Reinherz, Ellis L.; Zhang, Guang Lan; Brusic, Vladimir (Journal of Immunological Methods, 2013-12-31)

BlockLogo is a web-server application for the visualization of protein and nucleotide fragments, continuous protein sequence motifs, and discontinuous sequence motifs using calculation of block entropy from multiple sequence ...
Tumor antigens as proteogenomic biomarkers in invasive ductal carcinomas

Olsen, Lars Rønn; Campos, Benito; Winther, Ole; Sgroi, Dennis C.; Karger, Barry L.; Brusic, Vladimir (BMC Medical Genomics, 2014-12-08)

Background: The majority of genetic biomarkers for human cancers are defined by statistical screening of high-throughput genomics data. While a large number of genetic biomarkers have been proposed for diagnostic and ...